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Configure Shopify taxes for GST Manager
GST Manager calculates GST directly from your product selling prices (MRP) and generates tax invoices with the exact CGST/SGST/IGST breakdown.
For this calculation to work correctly, Shopify's native tax settings must be set to 0%. If Shopify also charges tax, tax will be added twice at checkout and invoice amounts won't match.
Shopify admin → Settings → Taxes and duties
Step-by-step setup
Follow these 5 steps in your Shopify admin:
1. Open tax settings
In Shopify admin, go to Settings → Taxes and duties.
2. Set all region rates to 0%
- Under Manage sales tax collection, click India (or your active regions).
- For every state or province listed, set the tax rate to 0%.
- If there are state-level overrides, ensure they are also set to 0%.
3. Turn off global tax settings
Scroll down to the Global settings section and uncheck these options:
- Uncheck "Include sales tax in product price and shipping rate"
- Uncheck "Charge tax on shipping rates"
Click Save at the top right.
4. Verify with a test draft order
- In Shopify admin, go to Orders → Create order.
- Add any product and select a customer.
- Check the Taxes line item — it must show ₹0.00.
- Discard the draft order once verified.
5. Check the GST Manager dashboard
- Go to Apps → GST Manager.
- Look at the Setup Health card.
- Confirm you see a green checkmark next to "Shopify taxes configured for GST Manager".
Setup Health helper
If anything is misconfigured, the Setup Health card on your dashboard will display an alert with a direct link to the exact Shopify setting that needs adjustment.
How shipping tax works
Since product prices are tax-inclusive:
- Do not enable Shopify's native "Charge tax on shipping rates" toggle.
- If you need to charge GST on shipping, turn on Apply GST to shipping charges under Apps → GST Manager → Settings → Tax Configuration.
- The app will automatically add shipping as a separate taxable line on the generated invoice with its SAC code (default:
9968).
Related pages
- Requirements — store prerequisites
- Quick setup wizard — the initial onboarding flow
- Invoices & credit notes — how tax invoices are generated
- Troubleshooting — resolving tax calculation issues